CDS

Accession Number TCMCG057C04447
gbkey CDS
Protein Id XP_018459480.1
Location complement(join(3175325..3175708,3175920..3176243,3176684..3176908,3177229..3177717,3177792..3178307))
Gene LOC108830369
GeneID 108830369
Organism Raphanus sativus

Protein

Length 645aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018603978.1
Definition PREDICTED: ERAD-associated E3 ubiquitin-protein ligase component HRD3A [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category MOT
Description Protein sel-1 homolog 2-like
KEGG_TC -
KEGG_Module M00403        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
KEGG_ko ko:K14026        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04141        [VIEW IN KEGG]
map04141        [VIEW IN KEGG]
GOs GO:0000151        [VIEW IN EMBL-EBI]
GO:0000153        [VIEW IN EMBL-EBI]
GO:0000835        [VIEW IN EMBL-EBI]
GO:0000836        [VIEW IN EMBL-EBI]
GO:0000839        [VIEW IN EMBL-EBI]
GO:0002790        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005789        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006638        [VIEW IN EMBL-EBI]
GO:0006639        [VIEW IN EMBL-EBI]
GO:0006641        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009306        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010243        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032940        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034976        [VIEW IN EMBL-EBI]
GO:0036503        [VIEW IN EMBL-EBI]
GO:0042175        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044432        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046486        [VIEW IN EMBL-EBI]
GO:0046903        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098827        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTGTCTCAAGTCAAAAGATCATAGCATTCACTTTCTTGCTTTACATTCATCGCGTCCAGGCTCAATACTTCTTCCTCAACTTCTCTGATGAAGATTTCCACAATGGTTTCGACAATAACAGCACAAACGAAGACTCTAACTACGAGAACTTCGGACAAACGGAGCCTAGATCCGACCAGGATCTTGATCCTGGTTCCTGGCGACCAATCTTGGAGCAGCTGGACGACTCAGTCGTCCACCCTGCGTTGACTCCGTACTACTCTGCCCTCAAGAAGATGGTCTCGGCCTCTAGCGAAGGAAACTTTATGTTGATGGAAGAAGCGGTTAACGAGGTGAACGCTTCTGCATCGGCAGGAGATCCTCCAGCACGGTCGGTGATGGGGTTCGTGTATGGGATGGGGATGACACTGGAGGCTAATGGATTAAAGTCGTTTCAGCAACATCAGTTAGCAGCTGAGGGAGGGAATATGCAGTCCAAGATGGCCCTTGCATTCAGATACGTACAACTAGATATGCATGATAAAGCTGCCAAGTTATATGCTGAGGTAGCGGGGACAGCACTCAGTAGCTTTTTGATCTCTAAGGATTTCTCCATGGTTGTACCACTTAGAATTCATAGAGGAGCAGAGGAAGACAAAGATGTGCTAAGGAGATTCCGTGGTGAAGACGGTGAAGATTTCAAGATATTGGAGTACCAGGCACAGATTGGGCATCCTTCAGCAATGTACAGAACTGGATTGTTTTATTATTTTTCTCTGAGAGGAATAAGACATGATCACGCCAAGGCAATGTACTGGTTCTCAGAGGCAGCAGAAAAGAGAGAGTTGAGGTCAATGGAGATTCTTGGTGAGATATATGCCCTAGGAACCGGTGTTGAGAAAAACTACACCAAGGCGTTTAGATGTCTCACACTGGCTGCAGAAGGAGGTCTGTATTCAGCATATACTGGCCTAGGGTACTTGTATCTCAAAGGATATGGAGTAGATAAGAACTACACTAAGGCCAGAGAATGTTTTGAGAAGGTTTCTGATAGGGAAGACCCAAGTGGGATGTACTACCTTGGAATGTTGTATCTTAAAGGCATCGGAGTCAAAAGAGATGTGAAGCAGGCAACCAAATACTTCCTTGTTGCTTCAAATGCTGGCCTACCAAAGGGTATGTATCAAATCGCCAAGATGTTACATGCTGCCGCCGAGCTCAAGAAGAATCCTAACATGCTGAAACTGGCTGTTGCTCTTTACAAGTCAGTAGCGGAAAGAGGGCCATGGAGTTCTCTCTCTAGATGGGCTCTTGAAGCTTACATGAAGGGTGATGTGGGAAAGGCTTTTATATTGTACTCAAGAATGTCAGAGCTTGGTTACGAAGTTGCACAAAGTAATGCTGCCTGGATCCTCGATAAATACGGTAAAAGGAGCATGTGCATGGGAGTTTCTGGATTTTGCACGGATAAAGAGAGGAAGGAACGTGCTCATGCTTTGTGGTGGCGAGCCTCCAAACAAGGAAACGACTATGCTGCTTTGCTTGTGGGAGATGCATATTACTATGGCCGGGGTAAGGAGAGGGATTTTGTGCGTGCAGCAGAGGCATACATGTATGCAAAATCTCAACTAAATGCACAAGCCATGTTCAACCTTGGTTACATGCATGAATATGGTCAAGGGCTTCCTTTTGATCTCAATCTTGCTAAAAGTTACTACAACCAAGCTCTCGAGAACGAGCCAGTATCCAAATTTCCAATCATGCTTGCTCTTGTGAGGTTGTGGGTTCGCAGGAACTACGTTGATGTTTCCATCATGGTGACTCTTCTTTTAGCCTCTCTTATAACCGTCCTACATCTCTTTAACAAGAGATCACAGCGCAGAGAGGTTACCGTGGATTCCATCGGTGCTGACGTTGCACAGCCTCTGGTTGAGTCTGCTGCTTTCCCCAACTGA
Protein:  
MSVSSQKIIAFTFLLYIHRVQAQYFFLNFSDEDFHNGFDNNSTNEDSNYENFGQTEPRSDQDLDPGSWRPILEQLDDSVVHPALTPYYSALKKMVSASSEGNFMLMEEAVNEVNASASAGDPPARSVMGFVYGMGMTLEANGLKSFQQHQLAAEGGNMQSKMALAFRYVQLDMHDKAAKLYAEVAGTALSSFLISKDFSMVVPLRIHRGAEEDKDVLRRFRGEDGEDFKILEYQAQIGHPSAMYRTGLFYYFSLRGIRHDHAKAMYWFSEAAEKRELRSMEILGEIYALGTGVEKNYTKAFRCLTLAAEGGLYSAYTGLGYLYLKGYGVDKNYTKARECFEKVSDREDPSGMYYLGMLYLKGIGVKRDVKQATKYFLVASNAGLPKGMYQIAKMLHAAAELKKNPNMLKLAVALYKSVAERGPWSSLSRWALEAYMKGDVGKAFILYSRMSELGYEVAQSNAAWILDKYGKRSMCMGVSGFCTDKERKERAHALWWRASKQGNDYAALLVGDAYYYGRGKERDFVRAAEAYMYAKSQLNAQAMFNLGYMHEYGQGLPFDLNLAKSYYNQALENEPVSKFPIMLALVRLWVRRNYVDVSIMVTLLLASLITVLHLFNKRSQRREVTVDSIGADVAQPLVESAAFPN